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eRAM

encyclopedia of Rare Disease Annotation for Precision Medicine



   adult t-cell leukemia/lymphoma
  

Disease ID 1114
Disease adult t-cell leukemia/lymphoma
Definition
aggressive T-cell malignancy with adult onset, caused by human T lymphotropic virus type 1.
Synonym
[m]adult t-cell leukaemia/lymphoma
[m]adult t-cell leukemia/lymphoma
adult t cell lymphoma/leukemia
adult t-cell leukaemia
adult t-cell leukaemia/lymphoma
adult t-cell leukaemia/lymphoma (clinical)
adult t-cell leukaemia/lymphoma (htlv-1 positive)
adult t-cell leukemia (disorder)
adult t-cell leukemia-lymphoma
adult t-cell leukemia-lymphomas
adult t-cell leukemia/lymphoma (clinical)
adult t-cell leukemia/lymphoma (disorder)
adult t-cell leukemia/lymphoma (htlv-1 positive)
adult t-cell leukemia/lymphoma (morphologic abnormality)
adult t-cell leukemias
adult t-cell lymphoma
adult t-cell lymphoma/leukaemia
adult t-cell lymphoma/leukaemia (htlv-1 +)
adult t-cell lymphoma/leukemia
adult t-cell lymphoma/leukemia (htlv-1 +)
atll
htlv all
htlv associated leukemia lymphoma
htlv i associated t cell leukemia lymphoma
htlv-1 associated adult t-cell lymphoma/leukemia
htlv-associated leukemia-lymphoma
htlv-associated leukemia-lymphomas
htlv-i associated adult t-cell leukemia/lymphoma
htlv-i-associated t-cell leukemia-lymphoma
htlv-i-associated t-cell leukemia-lymphomas
human t cell leukemia
human t cell leukemia lymphoma
human t lymphotropic virus associated leukemia lymphoma
human t lymphotropic virus-associated leukemia-lymphoma
human t-cell leukemia-lymphoma
human t-cell leukemia-lymphomas
leukemia lymphoma, adult t cell
leukemia lymphoma, t cell, acute, htlv i associated
leukemia, adult t cell
leukemia, adult t-cell
leukemia-lymphoma, adult t-cell
leukemia-lymphoma, adult t-cell [disease/finding]
leukemia-lymphoma, htlv-associated
leukemia-lymphoma, htlv-i-associated t-cell
leukemia-lymphoma, human t-cell
leukemia-lymphoma, t-cell, acute, htlv-i-associated
leukemia-lymphomas, adult t-cell
leukemia-lymphomas, htlv-associated
leukemia-lymphomas, htlv-i-associated t-cell
leukemia-lymphomas, human t-cell
leukemia/lymphoma, adult t-cell
leukemias, adult t-cell
t cell acute leukemia
t cell leukemia lymphoma, adult
t cell leukemia lymphoma, htlv i associated
t cell leukemia, adult
t-all
t-cell leukemia, adult
t-cell leukemia-lymphoma, adult
t-cell leukemia-lymphoma, htlv-i-associated
t-cell leukemia-lymphoma, human
t-cell leukemia-lymphomas, adult
t-cell leukemia-lymphomas, htlv-i-associated
t-cell leukemia-lymphomas, human
t-cell leukemia/lymphoma, adult
t-cell leukemias, adult
Orphanet
DOID
UMLS
C0023493
MeSH
SNOMED-CT
Comorbidity
UMLS | Disease | Sentences' Count(Total Sentences:25)
C0002173  |  follicular mucinosis  |  2
C0021141  |  syndrome of inappropriate antidiuretic hormone secretion  |  1
C0032285  |  pneumonia  |  1
C0023418  |  leukemia  |  1
C0007133  |  papillary carcinoma  |  1
C0023434  |  chronic lymphocytic leukemia  |  1
C0001339  |  acute pancreatitis  |  1
C0023492  |  t cell leukemia  |  1
C0019360  |  herpes zoster  |  1
C0005940  |  bone disease  |  1
C0302592  |  cervical carcinoma  |  1
C0011636  |  dermatophytosis  |  1
C0376545  |  hematological malignancies  |  1
C0238463  |  papillary carcinoma of thyroid  |  1
C0036416  |  scleritis  |  1
C0302592  |  cervical ca  |  1
C0032305  |  pneumocystis  |  1
C0026393  |  molluscum contagiosum  |  1
C0024299  |  lymphoma  |  1
C0019360  |  zoster  |  1
C0023448  |  lymphocytic leukemia  |  1
C0030305  |  pancreatitis  |  1
C0549473  |  carcinoma of thyroid  |  1
C0019158  |  hepatitis  |  1
C0019163  |  hepatitis b  |  1
Curated Gene
Entrez_id | Symbol | Resource(Total Genes:31)
6774  |  STAT3  |  CTD_human
3458  |  IFNG  |  CTD_human
1493  |  CTLA4  |  CTD_human
3440  |  IFNA2  |  CTD_human
332  |  BIRC5  |  CTD_human
3558  |  IL2  |  CTD_human
3565  |  IL4  |  CTD_human
5335  |  PLCG1  |  CTD_human
2534  |  FYN  |  CTD_human
3439  |  IFNA1  |  CTD_human
654  |  BMP6  |  CTD_human
1880  |  GPR183  |  CTD_human
50943  |  FOXP3  |  CTD_human
1452  |  CSNK1A1  |  CTD_human
3586  |  IL10  |  CTD_human
3662  |  IRF4  |  CTD_human
84433  |  CARD11  |  CTD_human
1460  |  CSNK2B  |  CTD_human
940  |  CD28  |  CTD_human
2625  |  GATA3  |  CTD_human
5579  |  PRKCB  |  CTD_human
7409  |  VAV1  |  CTD_human
3195  |  TLX1  |  CTD_human
7161  |  TP73  |  CTD_human
22807  |  IKZF2  |  CTD_human
29851  |  ICOS  |  CTD_human
1457  |  CSNK2A1  |  CTD_human
1233  |  CCR4  |  CTD_human
1236  |  CCR7  |  CTD_human
7014  |  TERF2  |  CTD_human
3181  |  HNRNPA2B1  |  CTD_human
Inferring Gene(Waiting for update.)
Text Mined Gene(Waiting for update.)
Locus(Waiting for update.)
Disease ID 1114
Disease adult t-cell leukemia/lymphoma
Integrated Phenotype(Waiting for update.)
Text Mined Phenotype
HPO | Name | Sentences' Count(Total Phenotypes:15)
HP:0002664  |  Neoplasia  |  6
HP:0002665  |  Lymphoma  |  2
HP:0012115  |  Liver inflammation  |  1
HP:0002090  |  Pneumonia  |  1
HP:0001909  |  Leukemia  |  1
HP:0002595  |  Gastrointestinal atony  |  1
HP:0100532  |  Scleritis  |  1
HP:0005550  |  Chronic lymphatic leukemia  |  1
HP:0001735  |  Acute pancreatitis  |  1
HP:0030731  |  Carcinoma  |  1
HP:0002797  |  Increased bone resorption  |  1
HP:0003072  |  Hypercalcemia  |  1
HP:0002895  |  Papillary thyroid carcinoma  |  1
HP:0001733  |  Pancreatic inflammation  |  1
HP:0002590  |  Paralytic ileus  |  1
Disease ID 1114
Disease adult t-cell leukemia/lymphoma
Manually Symptom
UMLS  | Name(Total Manually Symptoms:9)
C2240374  |  eosinophilia
C1955629  |  human herpesvirus 6 encephalitis
C1136085  |  monoclonal gammopathy
C0917990  |  acroosteolysis
C0598766  |  leukemogenesis
C0235896  |  pulmonary infiltration
C0037284  |  skin lesions
C0020437  |  hypercalcemia
C0018133  |  graft-versus-host disease
Text Mined Symptom
UMLS | Name | Sentences' Count(Total Symptoms:1)
C0009450  |  infection  |  2
Manually Genotype(Total Text Mining Genotypes:0)
(Waiting for update.)
Text Mining Genotype(Total Genotypes:0)
(Waiting for update.)
All Snps(Total Genotypes:3)
snpId pubmedId geneId geneSymbol diseaseId sourceId sentence score Year geneSymbol_dbSNP CHROMOSOME POS REF ALT
rs12979860232599307057THBS1umls:C0023493BeFreeIn an attempt to examine this hypothesis, we assessed the association of the rs12979860 genotypes with HTLV-1 PvL levels and clinical status in 112 unrelated Brazilian subjects (81 HTLV-1 asymptomatic carriers, 24 individuals with HAM/TSP and 7 with Adult T cell Leukemia/Lymphoma (ATLL)).0.0133006522012IFNL3;IFNL41939248147CT
rs129798602325993055729ATF7IPumls:C0023493BeFreeIn an attempt to examine this hypothesis, we assessed the association of the rs12979860 genotypes with HTLV-1 PvL levels and clinical status in 112 unrelated Brazilian subjects (81 HTLV-1 asymptomatic carriers, 24 individuals with HAM/TSP and 7 with Adult T cell Leukemia/Lymphoma (ATLL)).0.0171008382012IFNL3;IFNL41939248147CT
rs1297986023259930282617IFNL3umls:C0023493BeFreeThe Interleukin 28B (IL28B) rs12979860 polymorphisms was recently reported to be associated with the human T-cell leukemia virus type 1 (HTLV-1) proviral load (PvL) and the development of the HTLV-1-associated myelopathy/tropical spastic paraparesis (HAM/TSP).0.0005428842012IFNL3;IFNL41939248147CT
GWASdb Annotation(Total Genotypes:0)
(Waiting for update.)
GWASdb Snp Trait(Total Genotypes:0)
(Waiting for update.)
Mapped by lexical matching(Total Items:0)
(Waiting for update.)
Mapped by homologous gene(Total Items:0)
(Waiting for update.)
Disease ID 1114
Disease adult t-cell leukemia/lymphoma
Case(Waiting for update.)